Recent Publications

Published in collaboration with or by the Microscopy Imaging Center

Taatjes DJ, Ghule PN, Bouffard NA, et al. The Shared Core Resource as a Partner in Innovative Scientific Research: Illustration from an Academic Microscopy Imaging Center. Journal of Biomolecular Techniques. 2022;33(1). doi:10.7171/3fc1f5fe.2507f36c

Gasek N, Dearborn J, Enes SR, Pouliot R, Louie J, Phillips Z, Wrenn S, Uhl FE, Riveron A, Bianchi J, Commins SP, Delance N, Taatjes DJ, Boyson JE, Guthrie K, Petersen TH, Weiss DJ. Comparative immunogenicity of decellularized wild type and alpha 1,3 galactosyltransferase knockout pig lungs. Biomaterials. 2021 Sep;276:121029. doi: 10.1016/j.biomaterials.2021.121029. Epub 2021 Jul 15. PMID: 34311317.

Manuel AM, van de Wetering C, MacPherson M, Erickson C, Murray C, Aboushousha R, van der Velden J, Dixon AE, Poynter ME, Irvin CG, Taatjes DJ, van der Vliet A, Anathy V, Janssen-Heininger YMW. Dysregulation of Pyruvate Kinase M2 Promotes Inflammation in a Mouse Model of Obese Allergic Asthma. Am J Respir Cell Mol Biol. 2021 Jun;64(6):709-721. doi: 10.1165/rcmb.2020-0512OC.

Mühlfeld C, Taatjes DJ. Introduction: 3D imaging in lung biology. Histochem Cell Biol. 2021 Feb;155(2):159-162. doi: 10.1007/s00418-021-01968-z. PMID: 33569636.

Butnor KJ, Covington J, Taatjes DJ, DeWitt J, Von Turkovich MA. Fluorine detection in the lung tissue of a worker with interstitial pulmonary fibrosis and long-term occupational exposure to polytetrafluoroethylene and perfluorooctanoic acid. Ultrastruct Pathol. 2020 Nov 20;44(4-6):496-500. doi: 10.1080/01913123.2020.1842828. Epub 2020 Nov 17. PMID: 33200662.

Chia SB, Nolin JD, Aboushousha R, Erikson C, Irvin CG, Poynter ME, van der Velden J, Taatjes DJ, van der Vliet A, Anathy V, Janssen-Heininger YMW. Glutaredoxin deficiency promotes activation of the transforming growth factor beta pathway in airway epithelial cells, in association with fibrotic airway remodeling. Redox Biol. 2020 Oct;37:101720. doi: 10.1016/j.redox.2020.101720. Epub 2020 Sep 14. PMID: 32971362; PMCID: PMC7509797.

Rose JT, Moskovitz E, Boyd JR, Gordon JA, Bouffard NA, Fritz AJ, Illendula A, Bushweller JH, Lian JB, Stein JL, Zaidi SK, Stein GS. Inhibition of the RUNX1-CBFβ transcription factor complex compromises mammary epithelial cell identity: a phenotype potentially stabilized by mitotic gene bookmarking. Oncotarget. 2020 Jun 30;11(26):2512-2530. doi: 10.18632/oncotarget.27637. PMID: 32655837; PMCID: PMC7335667.

Pernal SP, Liyanaarachchi A, Gatti DL, Formosa B, Pulvender R, Kuhn ER, Ramos R, Naik AR, George K, Arslanturk S, Taatjes DJ, Jena BP. Nanoscale imaging using differential expansion microscopy. Histochem Cell Biol. 2020 Jun;153(6):469-480. doi: 10.1007/s00418-020-01869-7. Epub 2020 Mar 19. PMID: 32193594.

Greenfield SR, Tighe SW, Bai Y, Goerlitz DS, Von Turkovich M, Taatjes DJ, Dragon JA, Johnson SS. Life and its traces in Antarctica's McMurdo Dry Valley paleolakes: a survey of preservation. Micron. 2020 Apr;131:102818. doi: 10.1016/j.micron.2019.102818. Epub 2019 Dec 30. PMID: 31968300.

Naik AR, Kuhn ER, Lewis KT, Kokotovich KM, Maddipati KR, Chen X, Hörber JHK, Taatjes DJ, Potoff JJ, Jena BP. Self-Assembly and Biogenesis of the Cellular Membrane are Dictated by Membrane Stretch and Composition. J Phys Chem B. 2019 Aug 15;123(32):6997-7005. doi: 10.1021/acs.jpcb.9b04769. Epub 2019 Jul 31. PMID: 31322890.

Taatjes DJ, Schrader M, Koji T, Roth J. Histochemistry and Cell Biology: 61 years and not tired at all. Histochem Cell Biol. 2019 Jul;152(1):1-11. doi: 10.1007/s00418-019-01796-2. PMID: 31236664.

Taatjes DJ, Bouffard NA, Barrow T, Devitt KA, Gardner JA, Braet F. Quantitative pixel intensity- and color-based image analysis on minimally compressed files: implications for whole-slide imaging. Histochem Cell Biol. 2019 Jul;152(1):13-23. doi: 10.1007/s00418-019-01783-7. Epub 2019 Apr 13. PMID: 30982111.

Jena BP, Gatti DL, Arslanturk S, Pernal S, Taatjes DJ. Human skeletal muscle cell atlas: Unraveling cellular secrets utilizing 'muscle-on-a-chip', differential expansion microscopy, mass spectrometry, nanothermometry and machine learning. Micron. 2019 Feb;117:55-59. doi: 10.1016/j.micron.2018.11.002. Epub 2018 Nov 16. PMID: 30472499.

Rand JH, Taatjes DJ. Reimagining the antiphospholipid syndrome, an enigmatic thrombophilic disorder, through the looking glass of microscopic imaging. Histochem Cell Biol. 2018 Nov;150(5):529-543. doi: 10.1007/s00418-018-1709-2. Epub 2018 Aug 18. PMID: 30121745.

Pearson L, Taatjes DJ, von Turkovich M, King BJ, Zenali M. A Composite Renal Tumor with Dual Differentiation, Chromophobe and Collecting Duct Carcinoma. Case Rep Pathol. 2018 Aug 30;2018:2410920. doi: 10.1155/2018/2410920. PMID: 30228921; PMCID: PMC6136464.

Anathy V, Lahue KG, Chapman DG, Chia SB, Casey DT, Aboushousha R, van der Velden JLJ, Elko E, Hoffman SM, McMillan DH, Jones JT, Nolin JD, Abdalla S, Schneider R, Seward DJ, Roberson EC, Liptak MD, Cousins ME, Butnor KJ, Taatjes DJ, Budd RC, Irvin CG, Ho YS, Hakem R, Brown KK, Matsui R, Bachschmid MM, Gomez JL, Kaminski N, van der Vliet A, Janssen-Heininger YMW. Reducing protein oxidation reverses lung fibrosis. Nat Med. 2018 Aug;24(8):1128-1135. doi: 10.1038/s41591-018-0090-y. Epub 2018 Jul 9. PMID: 29988126; PMCID: PMC6204256.

Braet F, Taatjes DJ, Wisse E. Probing the unseen structure and function of liver cells through atomic force microscopy. Semin Cell Dev Biol. 2018 Jan;73:13-30. doi: 10.1016/j.semcdb.2017.07.001. Epub 2017 Jul 6. PMID: 28688930.

Braet F, Taatjes DJ. Foreword to the special issue on applications of atomic force microscopy in cell biology. Semin Cell Dev Biol. 2018 Jan;73:1-3. doi: 10.1016/j.semcdb.2017.06.025. Epub 2017 Jun 30. PMID: 28673678.

Taatjes DJ, Bouffard N, von Turkovich M, Quinn AS, Wu XX, Vasovic LV, Rand JH. Visualization of macro-immune complexes in the antiphospholipid syndrome by multi-modal microscopy imaging. Micron. 2017 Sep;100:23-29. doi: 10.1016/j.micron.2017.04.005. Epub 2017 Apr 24. PMID: 28463750.

Older Publications

Published in collaboration with or by the Microscopy Imaging Center

Taatjes, D.J., and Roth, J. (2016) The Histochemistry and Cell Biology omnium-gatherum: the year 2015 in review. Histochem. Cell Biol. 145, 239-274.

Taatjes, D.J., and Roth, J.  (2015) The Histochemistry Cell Biology Pandect: The Year 2014 in Review. Histochem. Cell Biol. 143, 339-368.

Taatjes, D.J., Quinn, A.S., Wu, X-X., Tsai, H-M., and Rand, J.H. (2014) Repair of nanodefects in a 2-dimensional crystal anticoagulant shield in the antiphospholipid syndrome: Novel molecular strategies assessed by atomic force microscopy. In: NanoCellBiology – Multimodal Imaging in Biology & Medicine (B.P. Jena and D.J. Taatjes, eds.) Pan Stanford Ltd., Singapore, pp. 157-171.

Taatjes, D.J., and Roth J. (2014) The Histochem Cell Biol conspectus: The year 2013 in review. Histochem. Cell Biol. 141, 337-363.

Taatjes, D.J. (2014) Cell biology of protein glycosylation: A celebration of the career of Jürgen Roth on the occasion of his 70th birthday. Cell Biol. Int. 38(5), 547-552.

Lewis, K.T., Maddipati, K.R., Taatjes, D.J., and Jena, B.P. (2014)  Neuronal porosome  lipidome. J. Cell. Mol. Med. 18(10), 1927-1937.

Jena, B., and Taatjes, D.J. (2014) NanoCellBiology – Multimodal Imaging in Biology & Medicine, Pan Stanford Publishing Ltd., Singapore.

Trotman WE, Taatjes DJ, Bovill EG. (2013) Multifluorescence confocal microscopy: application for a quantitative analysis of hemostatic proteins in human venous valves. Methods Mol Biol. 931:85-95.

Quinn AS, Rand JH, Wu XX, Taatjes DJ. (2013) Viewing dynamic interactions of proteins and a model lipid membrane with atomic force microscopy..  Methods Mol Biol.  931:259-93.

Taatjes DJ, Roth J. (2013) The Histochemistry and Cell Biology compendium: a review of 2012. Histochem Cell Biol. Jun;139(6):815-46.

Taatjes DJ, Quinn AS, Rand JH, Jena BP. (2013) Atomic force microscopy: High resolution dynamic imaging of cellular and molecular structure in health and disease.  J Cell Physiol. Oct;228(10):1949-55.

von Turkovich MA, Wadsworth MP, Pendlebury WW, Taatjes DJ. (2013) A novel combined imaging/morphometrical method for the analysis of human sural nerve biopsies for clinical diagnosis.  Methods Mol Biol. 931:391-411.

Quinn AS, Wu XX, Rand JH, Taatjes DJ. (2012) Insights into the pathophysiology of the antiphospholipid syndrome provided by atomic force microscopy.  Micron. Aug;43(8):851-62.

Rand JH, Wu X-X, Quinn AS, Taatjes DJ. (2010) The annexin A5-mediated pathogenic mechanism in the antiphospholipid syndrome: role in pregnancy losses and thrombosis. Lupus. 19, 460-469.

Taatjes DJ, Wadsworth MP, Sobel BE. (2010) Morphological and cytochemical methods for the identification of cell death by apoptosis, In: Apoptosis (Modern Insights into Disease from Molecules to Man series)(V.R. Preedy, ed.) CRC Press, Enfield, NH, pp.603-620.

Taatjes DJ, Wadsworth MP, Quinn AS, Rand JH, Bovill EG, Sobel BE. (2008) Imaging aspects of cardiovascular disease at the cell and molecular level.  Histochem. Cell Biol. 130, 235-245.

Rand J, Wu X, Quinn A, Taatjes DJ. (2008) Resistance to annexin A5 anticoagulant activity: a thrombogenic mechanism for the antiphospholipid syndrome. Lupus 17(10), 922-930.

Taatjes DJ, Sobel BE, Budd RC. (2008) Morphological and cytochemical determination of cell death by apoptosis. Histochem. Cell Biol. 129, 33-43.

Sobel BE, Zaman AKMT, Budd RC, Schneider DJ, Taatjes DJ. (2008) Attenuation of apoptosis and the eye of the beholder. Coron. Art. Dis. 19, 55-58.

Zuber C, Taatjes DJ, Roth J. (2007) Recent progress in histochemistry. Histochem. Cell Biol. 128, 557-594.